Echovirus3 full particle in complex with 6D10 Fab
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8gsd
Q-score: 0.556
Qi S, Fu W, Fan J, Zhang L, Zheng B, Wang K, Wang X, Zhu L, Li X, Zhang Y
Viruses (2022) 14 [ Pubmed: 36366420 DOI: doi:10.3390/v14112322 ]
- Genome polyprotein (26 kDa, Protein from Echovirus E3)
- Echovirus e3 (Virus from Echovirus E3)
- Sphingosine (299 Da, Ligand)
- Light chain of 6d10 (12 kDa, Protein from Mus musculus)
- Genome polyprotein (fragment) (7 kDa, Protein from Echovirus E3)
- Echovirus3 full particle in complex with 6d10 fab (Complex)
- Genome polyprotein (fragment) (32 kDa, Protein from Echovirus E3)
- Genome polyprotein (29 kDa, Protein from Echovirus E3)
- Heavy chain of 6d10 (12 kDa, Protein from Mus musculus)
- 6d10 fab (Complex from Mus musculus)
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7esd
Q-score: 0.239
Zhang Y, Liang D, Yuan F, Yan Y, Wang Z, Liu P, Yu Q, Zhang X, Wang X, Zheng A
PNAS (2022) 119 pp. e2110491119-e2110491119 [ DOI: doi:10.1073/pnas.2110491119 Pubmed: 35294288 ]
- Donggang virus (Virus from Donggang virus)
- Genome polyprotein (54 kDa, Protein from Donggang virus)
- Genome polyprotein (8 kDa, Protein from Donggang virus)
Resolution: 2.95 Å
EM Method: Single-particle
Fitted PDBs: 7wl3
Q-score: 0.566
Yang P, Shi D, Fu J, Zhang L, Chen R, Zheng B, Wang X, Xu S, Zhu L, Wang K
J Virol (2022) 96 pp. e0010522-e0010522 [ DOI: doi:10.1128/jvi.00105-22 Pubmed: 35442060 ]
- Coxsackievirus b5 (Virus from Coxsackievirus B5)
- Genome polyprotein (26 kDa, Protein from Coxsackievirus B5)
- Genome polyprotein (27 kDa, Protein from Coxsackievirus B5)
- Capsid protein (25 kDa, Protein from Coxsackievirus B5)
CVB5-intermediate altered particle containing VP1/VP2/VP3 and RNA genome
Resolution: 2.81 Å
EM Method: Single-particle
Fitted PDBs: 7xb2
Q-score: 0.576
Yang P, Shi D, Fu J, Zhang L, Chen R, Zheng B, Wang X, Xu S, Zhu L, Wang K
J Virol (2022) 96 pp. e0010522-e0010522 [ DOI: doi:10.1128/jvi.00105-22 Pubmed: 35442060 ]
- Coxsackievirus b5 (Virus from Coxsackievirus B5)
- Genome polyprotein (27 kDa, Protein from Coxsackievirus B5)
- Genome polyprotein (26 kDa, Protein from Coxsackievirus B5)
- Genome polyprotein (26 kDa, Protein from Coxsackievirus B5)
EV-D68 in complex with 8F12 Fab
Resolution: 2.89 Å
EM Method: Single-particle
Fitted PDBs: 7ec5
Q-score: 0.548
Zhang C, Xu C, Dai W, Wang Y, Liu Z, Zhang X, Wang X, Wang H, Gong S, Cong Y, Huang Z
Nat Commun (2021) 12 pp. 2904-2904 [ DOI: doi:10.1038/s41467-021-23199-5 Pubmed: 34006855 ]
- Genome polyprotein (27 kDa, Protein from EV68, EV-68)
- Capsid protein vp3 (27 kDa, Protein from EV68, EV-68)
- 8f12 fab (Complex from Mus musculus)
- Capsid protein vp1 (32 kDa, Protein from EV68, EV-68)
- Capsid protein vp4 (7 kDa, Protein from EV68, EV-68)
- Enterovirus d68 in complex with 8f12 fab (Complex)
- 8f12 fab light chain (23 kDa, Protein from Mus musculus)
- 8f12 fab heavy chain (23 kDa, Protein from Mus musculus)
- Enterovirus d68 (Virus from Enterovirus D68)
cryo-EM structure of human Aichi virus
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 5gka
Q-score: 0.487
Zhu L, Wang X, Ren J, Kotecha A, Walter TS, Yuan S, Yamashita T, Tuthill TJ, Fry EE, Rao Z, Stuart DI
Nat Microbiol (2016) 1 pp. 16150-16150 [ Pubmed: 27595320 DOI: doi:10.1038/nmicrobiol.2016.150 ]
- Aichi virus a846/88 (6 MDa, Virus from Aichi virus A846/88)
- Capsid protein vp1 (27 kDa, Protein from Aichi virus (strain Human/A846/88/1989))
- Genome polyprotein (23 kDa, Protein from Aichi virus (strain Human/A846/88/1989))
- Capsid protein vp0 (38 kDa, Protein from Aichi virus (strain Human/A846/88/1989))